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scientific publications microvisioneer manual slide scanning

SCIENTIFIC
PUBLICATIONS

Microvisioneer's manual slide scanning solutions are used by scientists all over the world.

Have a look at the list of selected scientific publications to get an impression of the versatile applications of Microvisioneer whole slide imaging and slide sharing solutions.

Exploring iron deposition patterns using light and electron microscopy in the mouse brain across aging and Alzheimer's disease pathology conditions

V Lau, J VanderZwaag, C Murray, ME Tremblay

Preprint available via Research Square: https://doi.org/10.21203/rs.3.rs-5364430/v1

Porphyromonas gingivalis GroEL accelerates abdominal aortic aneurysm formation by matrix metalloproteinase-2 SUMOylation in vascular smooth muscle cells: A novel finding for the activation of MMP-2

Y-W Lin, F-Y Lin, Z-H Lai, C-S Tsai, Y-T Tsai, Y-S Huang, C-W Liu

Molecular Oral Microbiology, 2024

Small Shelly Fauna Biodiversity from Reef-Adjacent Facies of the Upper Harkless Formation, Nevada

CC Bennett, C Mate, S Jacquet

Available at SSRN, 2024: https://dx.doi.org/10.2139/ssrn.5012444

​Automated detection of Filamentous Fungal Keratitis on Whole Slide Images of Potassium Hydroxide Smears with Multiple Instance Learning

JF Assaf, H Yazbeck, PN Venkatesh, L Prajna, R Gunasekaran, K Rajarathinam, TM Lietman, JD Keenan, JP Campbell, X Song, TK Redd

Ophthalmology Science

https://www.sciencedirect.com/science/article/pii/S2666914524001891

Development of an Oral Epithelial Ex Vivo Organ Culture Model for Biocompatibility and Permeability Assessment of Biomaterials

F Machla, C Bekiari, P Kyriaki Monou, E Kofidou et al.

Bioengineering, 2024

https://doi.org/10.3390/bioengineering11101035

CILP-2 expression in the intervertebral discs of patients with lumbar radiculopathy

K Koiv, M Aunapuu, T Torga, T Rätsep, K Bakhoff, A Arend

BMC Musculoskeletal Disorders, 2024

https://doi.org/10.1186/s12891-024-07996-9

Investigation of Ki67 and Phospho-Histone H3 Expression in Urothelial Carcinoma of the Bladder by Immunohistochemical Method

RO Yüceer and S Baspinar

Cureus, 2024

https://doi.org/10.7759/cureus.55297

Long-term recruitment of peripheral immune cells to brain scars after a neonatal insult

L Bolini, RM Pereira Campos, D Aparecida Spiess, FL Lima-Rosa, D Pereira Dantas, L Conde, R Mendez-Otero, AM Vale, P Moreno Pimentel-Coelho

Glia, 2024

https://doi.org/10.1002/glia.24490

The effect of Vortioxetine on the NLRP3 pathway and microglial activity in the prefrontal cortex in an experimental model of depression

G Ozdamar Unal, D Kumbul, K Hekimler Ozturk, G Erkilin, F Donmez, E Dogan Kiran, R Oguz Yuceer

Immunopharmacology and Immunotoxicology, 2024

https://doi.org/10.1080/08923973.2024.2308268

Searching for traces of human activity in earthen floor sequences: high-resolution geoarchaeological analyses at an Early Iron Age village in Central Iberia

L Tomé, E Iriarte, A Blanco-González, M Jambrina-Enríquez, N Éguez, A V. Herrera-Herrera, C Mallol

Journal of Archaeological Science, 2024

https://doi.org/10.1016/j.jas.2023.105897

The antidepressant fluoxetine (Prozac®) modulates serotonin signaling to alter maternal peripartum calcium homeostasis

RR Domingues, NN Teixeira, WS Frizzarini, AD Beard, MK Connelly, A Vang, MC Wiltbank, LL Hernandez

Scientific Reports, 2023

https://doi.org/10.1038/s41598-023-49253-4

StAR-related lipid transfer domain protein 3 (STARD3) regulates HER2 and promotes HER2-positive breast cancer progression through interaction with HSP90 and SRC signaling

DHN Binh, T-C Cheng, S-H Tu, Y-C Liao, Y-Y Yang, L-C Chen, Y-S Hu

American Journal of Cancer Research, 2023

PMCID: PMC10695785

Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics

G Lozachmeur, A Bramoulle, A Aubert, F Stüder, J Moehlin, L Madrange, F Yates, J-P Deslys, MA Mendoza-Parra

Cell Reports Methods, 2023

https://doi.org/10.1016/j.crmeth.2023.100573

Intermediate antiparallel beta structure in amyloid plaques revealed by infrared spectroscopic imaging

B Holcombe, A Foes, S Banerjee, K Yeh, S-H J Wang, R Bhargava, A Ghosh

bioRxiv preprint: https://doi.org/10.1101/2023.04.18.537414

Multiple Responses of Mytilus galloprovincialis to plastic microfibers

M Auguste, M Leonessi, M Bozzo, B Risso, L Cutroneo, S Prandi, A Jemec Kokalj, D Drobne, L Canesi

Science of The Total Environment, 2023

https://doi.org/10.1016/j.scitotenv.2023.164318

Garcinol acts as a novel integrin αIIbβ3 inhibitor in human platelets

C-W Hsia, W-C Huang, T Jayakumar, H-H Hsia, S-M Hou, C-C Chang, T-L Yen, J-R Sheu

Life Sciences, 2023

https://doi.org/10.1016/j.lfs.2023.121791

Dietary replacement of fishmeal with marine proteins recovered from shrimp and herring process waters promising in Atlantic salmon aquaculture

I Hedén, B Forghani Targhi, G Baardsen, B Westereng, T Svendsen, E Jönsson, L Hasselberg Frank, I Undeland, K Sundell, H Sundh

Aquaculture, 2023

https://doi.org/10.1016/j.aquaculture.2023.739735

Computational Pathology: A Survey Review and The Way Forward

MS Hosseini, BE Bejnordi, VQ-H Trinh, D Hasan et al.

arXiv preprint: https://doi.org/10.48550/arXiv.2304.05482

Aging-Associated Thyroid Dysfunction Contributes to Oxidative Stress and Worsened Functional Outcomes Following Traumatic Brain Injury

C-T Hsieh, T-L Yen, Y-H Chen, J-S Jan, R-D Teng, C-H Yang, J-M Sun

Antioxidants, 2023

https://doi.org/10.3390/antiox12020217

The Urban Biography of a Mauritanian City: Microstratigraphic Analysis of the Eastern Quarter of Tamuda (Morocco)

M Gutiérrez-Rodríguez, D Bernal-Casasola, JJ Díaz-Rodríguez, JM Vargas Girón, T Moujoud

African Archaeological Review, 2022

https://doi.org/10.1007/s10437-022-09506-5

The Nomadic Digital Pathologist. Validation of a simple, dual slide scanner with remote reporting for a regional upper gastrointestinal specialist multidisciplinary meeting

T Bracey

Journal of Pathology Informatics, 2022

https://doi.org/10.1016/j.jpi.2022.100161

Towards Highly Expressive Machine Learning Models of Non-Melanoma Skin Cancer

SM Thomas, JG Lefevre, G Baxter, NA Hamilton 

arXiv preprint: arXiv:2207.05749

Seasonal reproductive allocation in landlocked Alewife Alosa pseudoharengus, in the context of niche construction and eco‐evolutionary feedbacks

FA Mouchlianitis, ET Schultz, K Ganias

Ecology of Freshwater Fish, 2022

https://doi.org/10.1111/eff.12663

A New Artificial Intelligence-Based Method for Identifying Mycobacterium Tuberculosis in Ziehl–Neelsen Stain on Tissue

S ZuracC Mogodici, T Poncu, M Trăscău, C Popp et al.

Diagnostics (12), 2022

https://doi.org/10.3390/diagnostics12061484

Adrenal glands of mice and rats: A comparative morphometric study

A Siasios, G Delis, A Tsingotjidou, A Pourlis, I Grivas

Laboratory Animals (569), 2022

https://doi.org/10.1177/00236772211044352

Microstratigraphic analysis of the main Roman road in Hispania: the Via Augusta where it passes through the Ianus Augustus (Mengíbar, Spain)

M Gutiérrez-RodríguezMÁ Lechuga Chica, MI Moreno Padilla, JP Bellón Ruiz

Archaeological and Anthropological Sciences (14), 2022

https://doi.org/10.1007/s12520-022-01602-6

Patient with prostatic adenocarcinoma with plasmacytoid features and an aberrant immunohistochemical phenotype diagnosed by biopsy and a mini‑review of plasmacytoid features in the genitourinary system: A case report

K Zacharouli, DP Vageli, GK Koukoulis, M Ioannou

Molecular and Clinical Oncology (16), 2022

https://doi.org/10.3892/mco.2022.2500

A rare and complete response to combination therapy with radiation and nivolumab in a patient with metastatic urothelial cancer

A Hietala, J Joutsen, S Vaarala, M Säily

BMJ Case Reports (15), 2022

http://dx.doi.org/10.1136/bcr-2021-246653

The Arrangement of the Peripheral Olfactory System of Pleuragramma antarcticum: A Well-Exploited Small Sensor, an Aided Water Flow, and a Prominent Effort in Primary Signal Elaboration

S Aicardi, M Bozzo, A Amaroli, L Gallus et al.

Animals (12), 2022

https://doi.org/10.3390/ani12050663

The effects of hesperidin on stricture formation in corrosive esophageal burns: an experimental study

M Anayurt, A Karaman, Ö Balcı, IF Özgüner et al.

Esophagus (19), 2022

https://doi.org/10.1007/s10388-021-00861-x

Transmembrane protein 119 is neither a specific nor a reliable marker for microglia

E Vankriekelsvenne, U Chrzanowski, K Manzhula, T Greiner et al.

Glia (70), 2022

https://doi.org/10.1002/glia.24164

Heterodimer of A2A and Oxytocin Receptors Regulating Glutamate Release in Adult Striatal Astrocytes

S Amato, M Averna, D Guidolin, M Pedrazzi et al.

International Journal of Molecular Sciences (23), 2022

https://doi.org/10.3390/ijms23042326

Lack of Tgfbr1 and Acvr1b synergistically stimulates myofibre hypertrophy and accelerates muscle regeneration

MMG Hillege, A Shi, RA Galli, G Wu et al.

eLife (11), 2022

https://doi.org/10.7554/eLife.77610

Digestive and immune functions in the intestine of wild Ballan wrasse (Labrus bergylta)

W Zhou, Å Krogdahl, Ø Sæle, E Chikwati et al.

Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology (260), 2021

https://doi.org/10.1016/j.cbpa.2021.111011

Using clustering algorithms for identification of fish oocyte cohorts based on the characteristics of cytoplasmic structures

K Charitonidou, K Ganias

Theriogenology (170), 2021

https://doi.org/10.1016/j.theriogenology.2021.04.017

Fecundity pattern and spawning dynamics of the common cuttlefish Sepia officinalis

K Ganias, IF Kompogianni

Marine Biology Research (17), 2021

https://doi.org/10.1080/17451000.2022.2032176

Radiotherapy and High-Dose Interleukin-2: Clinical and Immunological Results of a Proof of Principle Study in Metastatic Melanoma and Renal Cell Carcinoma

J Bulgarelli, C Piccinini, E Petracci, E Pancisi et al.

Frontiers in Immunology (12), 2021

doi: 10.3389/fimmu.2021.778459

It takes time to heal a broken heart: ventricular plasticity improves heart performance after myocardial infarction in rainbow trout, Oncorhynchus mykiss

LA Zena, A Ekström, A Gräns, C Olsson et al.

Journal of Experimental Biology (224), 2021

https://doi.org/10.1242/jeb.243578

Cuprizone-induced demyelination triggers a CD8-pronounced T cell recruitment

H Kaddatz, S Joost, J Nedelcu, U Chrzanowski et al. 

Glia (69), 2021

https://doi.org/10.1002/glia.23937

Recurrence in Oral Premalignancy: Clinicopathologic and Immunohistochemical Analysis

M Georgaki, D Avgoustidis, VI Theofilou, E Piperi et al.

Diagnostics (11), 2021

https://doi.org/10.3390/diagnostics11050872

The Regulation of Non-Specific Membrane Permeability Transition in Yeast Mitochondria under Oxidative Stress

EP Isakova, OI Klein, YI Deryabina

Microbiology Research (12), 2021

https://doi.org/10.3390/microbiolres12020029

Novel approach for quantification of multiple immunofluorescent signals using histograms and 2D plot profiling of whole-section panoramic images

R Duplancic, D Kero

Scientific Reports (11), 2021

https://doi.org/10.1038/s41598-021-88101-1

The lytic polysaccharide monooxygenase CbpD promotes Pseudomonas aeruginosa virulence in systemic infection

F Askarian, S Uchiyama, H Masson, HV Sørensen et al.

Nature Communications (12), 2021

https://doi.org/10.1038/s41467-021-21473-0

Synergistic dispersal of plant pathogen spores by jumping-droplet condensation and wind

R Mukherjee, HA Gruszewski, LT Bilyeu, DG Schmale III, JB Boreyko

PNAS (118), 2021

https://doi.org/10.1073/pnas.21069381

Lipid Remodeling in the Mitochondria upon Ageing during the Long-Lasting Cultivation of Endomyces magnusii

EP Isakova, NN Gessler, DI Dergacheva, VM Tereshina et al.

Applied Sciences (11), 2021

https://doi.org/10.3390/app11094069

Phospholipase D1 and D2 synergistically regulate thrombus formation

LM Lien, WJ Lu, TY Chen, TY Lee et al.

International Journal of Molecular Sciences (21), 2020

https://doi.org/10.3390/ijms21186954

The formyl peptide receptor agonist Ac2-26 alleviates neuroinflammation in a mouse model of pneumococcal meningitis

M Rüger, E Kipp, N Schubert, N Schröder et al.

Journal of Neuroinflammation (17), 2020

https://doi.org/10.1186/s12974-020-02006-w

Cyberlindnera jadinii yeast as a protein source for broiler chickens: effects on growth performance and digestive function from hatching to 30 days of age

A Cruz, H Sterten, FS Steinhoff, LT Mydland, M Øverland

Poultry Science (99), 2020

https://doi.org/10.1016/j.psj.2020.01.023

Timing of oocyte recruitment within the ovulatory cycle of Macedonian shad, Alosa macedonica, a batch spawning fish with indeterminate fecundity

FA Mouchlianitis, G MinosK Ganias

Theriogenology (146), 2020

https://doi.org/10.1016/j.theriogenology.2020.01.050

Prefrontal cortex inflammation and liver pathologies accompany cognitive and motor deficits following Western diet consumption in non-obese female mice

E Veniaminova, M Oplatchikova, L Bettendorff, E Kotenkova et al.

Life Sciences (241), 2020

https://doi.org/10.1016/j.lfs.2019.117163

Silver (I) complexes with different pyridine-4, 5-dicarboxylate ligands as efficient agents for the control of cow mastitis associated pathogens

TP Andrejević, D MilivojevicBĐ GlišićJ Kljun

Dalton Transactions (49), 2020

https://doi.org/10.1039/D0DT00518E

Dendritic Cell Vaccination in Metastatic Melanoma Turns “Non-T Cell Inflamed” Into “T-Cell Inflamed” Tumors

J Bulgarelli, M Tazzari, AM Granato, L Ridolfi et al.

Frontiers in Immunology (10), 2019

https://doi.org/10.3389/fimmu.2019.02353

Powering the hagfish “bite”: The functional morphology of the retractor complex of two hagfish feeding apparatuses

BL Clubb, AJ Clark, TA Uyeno

Journal of Morphology (280), 2019

https://doi.org/10.1002/jmor.20986

Laquinimod supports remyelination in non-supportive environments

S Nyamoya, J Steinle, U Chrzanowski, J Kaye et al.

Cells (8), 2019

https://doi.org/10.3390/cells8111363

G-protein-coupled receptor Gpr17 expression in two multiple sclerosis remyelination models

S Nyamoya, P Leopold, B Becker, C Beyer et al.

Molecular Neurobiology (56), 2019

https://doi.org/10.1007/s12035-018-1146-1

Vertical ridge augmentation using guided bone regeneration procedure and dental pulp derived mesenchymal stem cells with simultaneous dental implant placement: A histologic study in a sheep model

HA Çolpak, ZB Gönen, S Özdamar, A Alkan, N Kütük

Journal of Stomatology, Oral and Maxillofacial Surgery (120), 2019

https://doi.org/10.1016/j.jormas.2018.12.011

Syndecans and enzymes for heparan sulfate biosynthesis and modification differentially correlate with presence of inflammatory infiltrate in periodontitis

R Duplancic, M Roguljic, I Puhar, N Vecek et al.

Frontiers in Physiology (10), 2019

https://doi.org/10.3389/fphys.2019.01248

 

High-resolution dynamic illustrations in soil micromorphology: A proposal for presenting and sharing primary research data in publication

M Gutiérrez-RodríguezM Toscano, P Goldberg

Journal of Archaeological Science: Reports (20), 2018

https://doi.org/10.1016/j.jasrep.2018.05.025

 


 

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